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  • Negative cofitness for GFF4298 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer protein TraG
    SEED: IncF plasmid conjugative transfer protein TraG

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3502 Two-component system sensor histidine kinase -0.81
    2 GFF5151 RNA polymerase ECF-type sigma factor -0.80
    3 GFF5268 hypothetical protein -0.79
    4 GFF4296 hypothetical protein -0.77
    5 GFF4072 ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13) -0.77
    6 GFF1656 Proline dipeptidase -0.77
    7 GFF5010 Protein formerly called heavy metal resistance transcriptional regulator HmrR -0.76
    8 GFF4203 DNA polymerase IV (EC 2.7.7.7) -0.75
    9 GFF3015 Microsomal dipeptidase (EC 3.4.13.19) -0.74
    10 GFF2843 Phospholipase A1 (EC 3.1.1.32) (EC 3.1.1.4) @ Outer membrane phospholipase A -0.73
    11 GFF3847 Tas protein, an NADP(H)-dependent aldo-keto reductase -0.72
    12 GFF1944 hypothetical protein -0.72
    13 GFF4112 hypothetical protein -0.71
    14 GFF3353 hypothetical protein -0.71
    15 GFF2350 PilT protein-like -0.70
    16 GFF252 hypothetical protein -0.70
    17 GFF2259 '5'-nucleotidase SurE (EC 3.1.3.5)' transl_table=11 -0.70
    18 GFF2245 Thioesterase superfamily -0.69
    19 GFF3441 hypothetical protein -0.69
    20 GFF4633 Broad-specificity glycerol dehydrogenase (EC 1.1.99.22), subunit SldA -0.69

    Or look for positive cofitness