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  • Negative cofitness for GFF4279 from Variovorax sp. SCN45

    3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-)
    SEED: 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-)
    KEGG:

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3424 FIG00443816: hypothetical protein -0.63
    2 GFF2603 Tripartite tricarboxylate transporter TctC family -0.63
    3 GFF2170 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.62
    4 GFF4246 FIG00464377: hypothetical protein -0.60
    5 GFF4710 MutT/Nudix family protein -0.59
    6 GFF5035 Opine oxidase subunit A -0.59
    7 GFF2160 Aspartate carbamoyltransferase (EC 2.1.3.2) -0.58
    8 GFF4580 hypothetical protein -0.58
    9 GFF5259 Na+/solute symporter -0.57
    10 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) -0.57
    11 GFF5424 Membrane protein TerC, possibly involved in tellurium resistance -0.57
    12 GFF6324 Kup system potassium uptake protein -0.56
    13 GFF5036 Opine oxidase subunit B -0.56
    14 GFF6033 Branched-chain amino acid ABC transporter, permease protein LivH (TC 3.A.1.4.1) -0.56
    15 GFF6767 no description -0.56
    16 GFF1166 Murein-DD-endopeptidase (EC 3.4.99.-) -0.55
    17 GFF2728 hypothetical protein -0.55
    18 GFF1788 hypothetical protein -0.55
    19 GFF4878 putative lipoprotein -0.54
    20 GFF5314 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ -0.54

    Or look for positive cofitness