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  • Negative cofitness for PS417_02175 from Pseudomonas simiae WCS417

    transcriptional regulator
    SEED: Transcriptional repressor of PutA and PutP / Proline dehydrogenase (EC 1.5.99.8) (Proline oxidase) / Delta-1-pyrroline-5-carboxylate dehydrogenase (EC 1.5.1.12)
    KEGG: proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_12630 monooxygenase -0.22
    2 PS417_19550 thioesterase -0.21
    3 PS417_22550 ATP-binding protein -0.20
    4 PS417_07380 hypothetical protein -0.20
    5 PS417_19545 peptide synthase -0.19
    6 PS417_18400 D-ribose ABC transporter, ATPase component RbsA (from data) -0.19
    7 PS417_20255 copper resistance protein CopB -0.18
    8 PS417_16460 hypothetical protein -0.18
    9 PS417_14920 CoA-transferase -0.18
    10 PS417_00920 diguanylate cyclase -0.18
    11 PS417_04225 conjugal transfer protein TraR -0.17
    12 PS417_04010 glycine/betaine ABC transporter ATP-binding protein -0.16
    13 PS417_08535 enoyl-CoA hydratase -0.16
    14 PS417_14390 acyl-homoserine lactone acylase subunit beta -0.16
    15 PS417_17170 carbon-nitrogen hydrolase -0.16
    16 PS417_06810 hemolysin -0.16
    17 PS417_20205 LysR family transcriptional regulator -0.16
    18 PS417_24825 ethanolamine ammonia-lyase -0.15
    19 PS417_05255 hypothetical protein -0.15
    20 PS417_10575 DNA alkylation repair protein -0.15

    Or look for positive cofitness