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  • Negative cofitness for GFF4267 from Sphingobium sp. HT1-2

    IncF plasmid conjugative transfer protein TraD
    SEED: IncW plasmid conjugative protein TrwB (TraD homolog)

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2245 Thioesterase superfamily -0.82
    2 GFF1995 sigma-54 dependent DNA-binding response regulator -0.74
    3 GFF2965 hypothetical protein -0.73
    4 GFF5149 hypothetical protein -0.72
    5 GFF2090 Transamidase GatB domain protein -0.72
    6 GFF2717 hypothetical protein -0.71
    7 GFF514 hypothetical protein -0.70
    8 GFF291 hypothetical protein -0.69
    9 GFF2558 Peptidase, M23/M37 family -0.68
    10 GFF2280 FIG00636104: hypothetical protein -0.68
    11 GFF1090 Type IV secretory pathway, VirD2 components (relaxase) -0.67
    12 GFF881 Maleylacetoacetate isomerase (EC 5.2.1.2) @ Glutathione S-transferase, zeta (EC 2.5.1.18) -0.67
    13 GFF1079 Lactoylglutathione lyase (EC 4.4.1.5) -0.67
    14 GFF4496 hypothetical protein -0.66
    15 GFF4160 Ankyrin -0.66
    16 GFF3874 Ligand-binding SRPBCC domain protein family -0.66
    17 GFF3723 Glucans biosynthesis glucosyltransferase H -0.66
    18 GFF3569 hypothetical protein -0.65
    19 GFF4752 Transcriptional regulator, MerR family -0.64
    20 GFF191 Conjugative transfer protein TrbE -0.64

    Or look for positive cofitness