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  • Negative cofitness for GFF4261 from Variovorax sp. SCN45

    RNA polymerase ECF-type sigma factor
    KEGG: RNA polymerase sigma-70 factor, ECF subfamily

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4232 no description -0.52
    2 GFF2872 Cell division protein FtsL -0.50
    3 GFF5352 Split AAA-ATPase protein PA0787 -0.50
    4 GFF198 Isochorismate pyruvate-lyase (EC 4.2.99.21) -0.50
    5 GFF3291 no description -0.49
    6 GFF1652 Uncharacterized MFS-type transporter -0.49
    7 GFF1969 ABC transporter, ATP-binding protein (cluster 1, maltose/g3p/polyamine/iron); ABC transporter, ATP-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.48
    8 GFF3561 Glycosyltransferases involved in cell wall biogenesis -0.48
    9 GFF7281 no description -0.48
    10 GFF1137 FIG00348850: hypothetical protein -0.48
    11 GFF2976 hypothetical protein -0.48
    12 GFF216 Transmembrane regulator protein PrtR -0.47
    13 GFF1286 FIG00932541: hypothetical protein -0.47
    14 GFF5982 Transcriptional regulator, AcrR family -0.47
    15 GFF1752 Cysteine dioxygenase (EC 1.13.11.20) -0.46
    16 GFF580 Rhodanese domain protein UPF0176, Betaproteobacterial subgroup -0.46
    17 GFF7174 no description -0.46
    18 GFF886 Protein of unknown function DUF1446 -0.46
    19 GFF4099 Ser/Thr protein phosphatase family protein -0.46
    20 GFF2032 Excinuclease ABC subunit A, dimeric form -0.45

    Or look for positive cofitness