Negative cofitness for GFF4229 from Variovorax sp. SCN45

Transcriptional regulator
SEED: Transcriptional regulator
KEGG: transcriptional regulator

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF1842 Transcriptional regulator, LysR family -0.55
2 GFF1602 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) -0.54
3 GFF1820 FIG137887: membrane protein related to purine degradation -0.52
4 GFF7105 Homoprotocatechuate degradative operon repressor -0.50
5 GFF6833 FIG00432169: hypothetical protein -0.49
6 GFF6355 T6SS secretion lipoprotein TssJ (VasD) -0.48
7 GFF1880 Previously called glutamate synthase [NADPH] small chain -0.48
8 GFF716 no description -0.47
9 GFF2868 Glyoxylate reductase (EC 1.1.1.79) / Glyoxylate reductase (EC 1.1.1.26) / Hydroxypyruvate reductase (EC 1.1.1.81); 2-ketoaldonate reductase, broad specificity (EC 1.1.1.215) -0.47
10 GFF2589 no description -0.47
11 GFF4925 ATPase component BioM of energizing module of biotin ECF transporter -0.47
12 GFF4192 no description -0.46
13 GFF4382 FIG00957806: hypothetical protein -0.46
14 GFF2000 Phosphomethylpyrimidine synthase ThiC (EC 4.1.99.17) -0.45
15 GFF4703 Xylitol dehydrogenase (EC 1.1.1.9) -0.45
16 GFF3932 Acetyltransferase, GNAT family -0.45
17 GFF1860 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.44
18 GFF3572 Efflux ABC transporter, permease protein -0.44
19 GFF5029 Transcriptional regulator, IclR family -0.44
20 GFF4416 Conjugative transfer protein TrbD -0.44

Or look for positive cofitness