Negative cofitness for GFF4182 from Variovorax sp. SCN45

Extracytoplasmic function (ECF) sigma factor VreI
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF6005 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.51
2 GFF5247 hypothetical protein -0.51
3 GFF3970 Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13) -0.50
4 GFF6473 hypothetical protein -0.50
5 GFF3695 hypothetical protein -0.50
6 GFF3892 no description -0.49
7 GFF5482 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system -0.48
8 GFF7109 BUG/TctC family periplasmic protein -0.47
9 GFF3708 ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) / ABC transporter, ATP-binding protein (cluster 11, riboflavin/purine nucleoside/unknown) -0.47
10 GFF3563 L-carnitine dehydratase/bile acid-inducible protein F -0.47
11 GFF5016 ATP-dependent RNA helicase RhlE (EC 3.6.4.13) -0.47
12 GFF6738 Uncharacterized aldehyde oxidase, molybdopterin-binding subunit -0.47
13 GFF3176 Two-component transcriptional response regulator, LuxR family -0.47
14 GFF6650 no description -0.46
15 GFF4081 Multicopper oxidase -0.46
16 GFF3374 no description -0.45
17 GFF1874 4-hydroxy-tetrahydrodipicolinate synthase (EC 4.3.3.7) -0.45
18 GFF373 Probable transmembrane protein -0.45
19 GFF6974 no description -0.45
20 GFF3297 hypothetical protein Ajs_0007 -0.45

Or look for positive cofitness