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  • Negative cofitness for PS417_21335 from Pseudomonas simiae WCS417

    sugar ABC transporter substrate-binding protein
    SEED: L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2)
    KEGG: L-arabinose transport system substrate-binding protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_15725 nitrate/nitrite transporter NarK -0.21
    2 PS417_15710 nitrate reductase -0.18
    3 PS417_15150 hypothetical protein -0.18
    4 PS417_25695 peroxiredoxin -0.18
    5 PS417_15415 membrane protein -0.17
    6 PS417_25090 hypothetical protein -0.17
    7 PS417_21600 pilus assembly protein PilZ -0.17
    8 PS417_11780 AraC family transcriptional regulator -0.16
    9 PS417_08610 deoxyguanosinetriphosphate triphosphohydrolase -0.16
    10 PS417_14785 glycine/betaine ABC transporter -0.16
    11 PS417_10640 GNAT family acetyltransferase -0.16
    12 PS417_09770 MFS transporter -0.16
    13 PS417_15695 molybdenum cofactor biosynthesis protein A -0.16
    14 PS417_00455 hypothetical protein -0.16
    15 PS417_00240 anhydrase -0.15
    16 PS417_12635 alkanesulfonate monooxygenase -0.15
    17 PS417_25115 lipopolysaccharide biosynthesis protein -0.15
    18 PS417_19965 histidine kinase -0.15
    19 PS417_12885 phosphatidylcholine synthase -0.15
    20 PS417_14555 AsnC family transcriptional regulator -0.15

    Or look for positive cofitness