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  • Negative cofitness for PS417_21275 from Pseudomonas simiae WCS417

    GntR family transcriptional regulator
    SEED: Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1)

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06615 ABC transporter for branched-chain amino acids, substrate-binding component (from data) -0.56
    2 PS417_06605 leucine/isoleucine/valine transporter permease subunit -0.50
    3 PS417_12895 pyruvate dehydrogenase -0.49
    4 PS417_16500 arginyl-tRNA-protein transferase -0.46
    5 PS417_04270 ribonuclease G -0.43
    6 PS417_04055 peptide transporter -0.40
    7 PS417_04060 dipeptide ABC transporter, permease component (from data) -0.38
    8 PS417_23890 ATPase -0.37
    9 PS417_04075 peptide ABC transporter substrate-binding protein -0.37
    10 PS417_04070 porin -0.36
    11 PS417_01505 gamma-aminobutyrate transporter -0.36
    12 PS417_26985 phosphoenolpyruvate-protein phosphotransferase -0.36
    13 PS417_07560 universal stress protein UspA -0.35
    14 PS417_23700 aromatic amino acid transporter -0.33
    15 PS417_23250 S-adenosylmethionine tRNA ribosyltransferase -0.33
    16 PS417_12200 microcin ABC transporter permease -0.33
    17 PS417_17640 macrolide ABC transporter ATP-binding protein -0.31
    18 PS417_28135 sodium:alanine symporter -0.30
    19 PS417_24295 carbon starvation protein A -0.30
    20 PS417_12195 ABC transporter permease -0.29

    Or look for positive cofitness