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  • Negative cofitness for GFF412 from Variovorax sp. SCN45

    Transcription-repair coupling factor
    SEED: Transcription-repair coupling factor
    KEGG: transcription-repair coupling factor (superfamily II helicase)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5860 no description -0.67
    2 GFF6873 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.64
    3 GFF3877 Uncharacterized chaperone protein YegD -0.59
    4 GFF975 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9) -0.58
    5 GFF4422 Conjugative transfer protein TrbG -0.58
    6 GFF2830 Uncharacterized protein CC_3061 -0.57
    7 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) -0.56
    8 GFF3456 Possible regulatory protein similar to urea ABC transporter, substrate binding protein -0.55
    9 GFF1148 hypothetical protein -0.54
    10 GFF3851 Uncharacterized MFS-type transporter -0.54
    11 GFF1643 MbtH-like NRPS chaperone -0.53
    12 GFF1316 Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12) -0.52
    13 GFF5018 Uncharacterized protein YpeB -0.52
    14 GFF3479 no description -0.52
    15 GFF5043 ABC transporter, permease protein (cluster 9, phospholipid) -0.51
    16 GFF3893 hypothetical protein -0.51
    17 GFF4401 no description -0.51
    18 GFF248 Cell division protein FtsH (EC 3.4.24.-) -0.51
    19 GFF266 RND efflux system, inner membrane transporter -0.50
    20 GFF5637 Molybdenum ABC transporter ATP-binding protein ModC -0.49

    Or look for positive cofitness