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  • Negative cofitness for GFF4111 from Variovorax sp. SCN45

    ABC-type amino acid transport/signal transduction system, periplasmic component/domain
    SEED: ABC transporter amino acid-binding protein
    KEGG: polar amino acid transport system substrate-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF1331 Transcriptional regulator, AraC family -0.62
    2 GFF2527 GCN5-related N-acetyltransferase -0.61
    3 GFF4096 no description -0.56
    4 GFF1435 BUG/TctC family periplasmic protein -0.55
    5 GFF4937 no description -0.54
    6 GFF3036 no description -0.54
    7 GFF940 Permease of the drug/metabolite transporter (DMT) superfamily -0.53
    8 GFF4391 Acriflavin resistance protein -0.52
    9 GFF5051 MBL-fold metallohydrolase SPO0683 -0.50
    10 GFF3270 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) -0.48
    11 GFF3249 Guanyl-specific ribonuclease (EC 3.1.27.3) -0.47
    12 GFF971 NLP/P60 protein -0.46
    13 GFF1912 Transcriptional regulator, LysR family -0.46
    14 GFF6304 Biosynthetic Aromatic amino acid aminotransferase beta (EC 2.6.1.57) -0.46
    15 GFF5664 hypothetical protein -0.45
    16 GFF1531 hypothetical protein -0.45
    17 GFF6515 no description -0.45
    18 GFF2152 twitching motility protein PilH -0.45
    19 GFF2276 Chlorogenate esterase -0.45
    20 GFF1983 D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase (EC 3.1.3.82); Histidinol-phosphatase (EC 3.1.3.15) -0.45

    Or look for positive cofitness