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  • Negative cofitness for GFF4087 from Variovorax sp. SCN45

    Cystathionine beta-lyase (EC 4.4.1.8)
    SEED: Cystathionine beta-lyase (EC 4.4.1.8)
    KEGG: cystathionine beta-lyase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3710 Lactoylglutathione lyase and related lyases -0.58
    2 GFF99 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.56
    3 GFF6121 FIG003461: hypothetical protein -0.54
    4 GFF1643 MbtH-like NRPS chaperone -0.51
    5 GFF7246 HtrA protease/chaperone protein -0.50
    6 GFF1075 no description -0.48
    7 GFF4603 Short-chain dehydrogenase, associated with 2-hydroxychromene-2-carboxylate isomerase family protein -0.48
    8 GFF5475 Uncharacterized MFS-type transporter -0.48
    9 GFF3203 no description -0.48
    10 GFF3697 ATP-dependent DNA ligase (EC 6.5.1.1) LigC -0.48
    11 GFF2556 UPF0337 family protein -0.47
    12 GFF5502 Transcriptional regulator, LysR family -0.47
    13 GFF773 hypothetical protein -0.47
    14 GFF40 no description -0.47
    15 GFF1842 Transcriptional regulator, LysR family -0.46
    16 GFF6925 Acetyl-CoA synthetase (EC 6.2.1.1) -0.46
    17 GFF4928 hypothetical protein -0.45
    18 GFF1651 Transcriptional regulator, AcrR family -0.45
    19 GFF4300 Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) / conserved protein associated with acetyl-CoA C-acyltransferase -0.45
    20 GFF1306 no description -0.45

    Or look for positive cofitness