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  • Negative cofitness for PS417_20575 from Pseudomonas simiae WCS417

    ATP-dependent helicase HrpA
    SEED: ATP-dependent RNA helicase HrpA (EC 3.6.4.13)

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_26650 histidine kinase -0.35
    2 PS417_26655 chemotaxis protein -0.35
    3 PS417_26660 protein PilI -0.32
    4 PS417_26645 chemotaxis protein -0.29
    5 PS417_23760 DeoR faimly transcriptional regulator -0.29
    6 PS417_26405 diguanylate cyclase -0.28
    7 PS417_02985 diguanylate cyclase -0.28
    8 PS417_26055 cyclic nucleotide-binding protein -0.27
    9 PS417_15255 serine/threonine protein kinase -0.26
    10 PS417_27875 histidine kinase -0.25
    11 PS417_01415 glycosyl transferase family 1 -0.24
    12 PS417_11880 oxidoreductase -0.24
    13 PS417_22480 ferritin -0.24
    14 PS417_01405 sugar transporter -0.24
    15 PS417_01395 biofilm formation protein PelB -0.24
    16 PS417_11900 conjugal transfer protein TraR -0.23
    17 PS417_01410 transporter -0.23
    18 PS417_05090 ferric citrate outer membrane transporter (fecA) (from data) -0.23
    19 PS417_06370 cold-shock protein -0.22
    20 PS417_00910 diguanylate cyclase -0.22

    Or look for positive cofitness