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  • Negative cofitness for GFF3997 from Variovorax sp. SCN45

    Short-chain dehydrogenase/reductase SDR
    SEED: Short-chain dehydrogenase/reductase SDR

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6353 T6SS outer membrane component TssL (ImpK/VasF) / OmpA/MotB domain -0.52
    2 GFF1317 no description -0.52
    3 GFF3748 KEGG: dihydrodipicolinate synthase -0.50
    4 GFF5587 Acetoin dehydrogenase E1 component alpha-subunit (EC 2.3.1.190) -0.50
    5 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain -0.50
    6 GFF267 no description -0.49
    7 GFF4223 BUG/TctC family periplasmic protein -0.49
    8 GFF1579 hypothetical protein -0.49
    9 GFF2876 no description -0.48
    10 GFF5845 NAD synthetase (EC 6.3.1.5) -0.48
    11 GFF7231 no description -0.48
    12 GFF6567 hypothetical protein -0.47
    13 GFF6566 hypothetical protein -0.47
    14 GFF7118 4-hydroxythreonine-4-phosphate dehydrogenase (EC 1.1.1.262) -0.47
    15 GFF1349 Thioesterase -0.47
    16 GFF153 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.47
    17 GFF5201 L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) -0.47
    18 GFF308 Oxidoreductase, short-chain dehydrogenase/reductase family -0.46
    19 GFF1804 Uncharacterized UPF0118 membrane protein -0.46
    20 GFF973 PQQ-dependent oxidoreductase, gdhB family -0.46

    Or look for positive cofitness