• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF3987 from Variovorax sp. SCN45

    3-hydroxybutyrate dehydrogenase (EC 1.1.1.30)
    SEED: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF440 CobN-like chelatase BtuS for metalloporphyrine salvage -0.53
    2 GFF6966 Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4) -0.51
    3 GFF5929 Mll2356 protein -0.51
    4 GFF6393 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13), C-terminal domain -0.50
    5 GFF799 Rrf2 family transcriptional regulator, group III -0.49
    6 GFF1229 4-hydroxybutyrate coenzyme A transferase -0.49
    7 GFF1166 Murein-DD-endopeptidase (EC 3.4.99.-) -0.48
    8 GFF7034 FIG00538743: hypothetical protein -0.47
    9 GFF5071 AmpG permease -0.47
    10 GFF4305 ABC transporter, ATP-binding protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) -0.47
    11 GFF4187 hypothetical protein -0.47
    12 GFF2096 Acyl-CoA dehydrogenase family protein -0.47
    13 GFF4638 CDP-glucose 4,6-dehydratase (EC 4.2.1.45) -0.46
    14 GFF2538 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) -0.46
    15 GFF5961 Acetyltransferase -0.46
    16 GFF4610 Long chain acyl-CoA dehydrogenase [fadN-fadA-fadE operon] (EC 1.3.8.8) -0.46
    17 GFF2728 hypothetical protein -0.46
    18 GFF1914 Guanine deaminase (EC 3.5.4.3) -0.45
    19 GFF650 Response regulator -0.45
    20 GFF7414 no description -0.45

    Or look for positive cofitness