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  • Negative cofitness for GFF3984 from Variovorax sp. SCN45

    Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1)
    SEED: Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)
    KEGG: branched-chain amino acid transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF76 Alkanesulfonates transport system permease protein -0.63
    2 GFF7334 Nucleoside-diphosphate-sugar epimerases -0.60
    3 GFF5212 Alkaline phosphatase (EC 3.1.3.1) -0.58
    4 GFF3073 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) -0.56
    5 GFF3852 Tetrapyrrole methylase family protein -0.56
    6 GFF4816 FIG01074109: hypothetical protein -0.54
    7 GFF7167 Pirin -0.54
    8 GFF3458 Rubisco activation protein CbbQ -0.52
    9 GFF613 hypothetical protein -0.51
    10 GFF4098 hypothetical protein -0.51
    11 GFF6101 Ser/Thr protein phosphatase family protein -0.50
    12 GFF2691 no description -0.50
    13 GFF6792 Glycerophosphoryl diester phosphodiesterase (EC 3.1.4.46) -0.49
    14 GFF4068 Heavy metal sensor histidine kinase -0.49
    15 GFF6370 T6SS component Hcp -0.48
    16 GFF900 hypothetical protein -0.48
    17 GFF654 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.47
    18 GFF7299 MotA/TolQ/ExbB proton channel family protein -0.47
    19 GFF6335 no description -0.47
    20 GFF7149 4-hydroxyproline epimerase (EC 5.1.1.8) -0.47

    Or look for positive cofitness