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  • Negative cofitness for GFF3978 from Variovorax sp. SCN45

    ABC-type branched-chain amino acid transport systems, periplasmic component
    SEED: Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF7303 Glucose-1-phosphate adenylyltransferase (EC 2.7.7.27) -0.61
    2 GFF5165 Transcriptional regulator, LysR family -0.61
    3 GFF517 no description -0.58
    4 GFF7302 Glycogen synthase, ADP-glucose transglucosylase (EC 2.4.1.21) -0.58
    5 GFF1847 Nucleoside ABC transporter, substrate-binding protein -0.54
    6 GFF5710 no description -0.54
    7 GFF80 no description -0.54
    8 GFF5015 Putative stomatin/prohibitin-family membrane protease subunit aq_911 -0.54
    9 GFF4955 hypothetical protein -0.53
    10 GFF2824 TonB-dependent hemin, ferrichrome receptor -0.53
    11 GFF835 Two-component system sensor histidine kinase -0.52
    12 GFF4807 Uncharacterized GST-like protein yncG -0.52
    13 GFF4296 hypothetical protein -0.51
    14 GFF5375 Acyl-CoA dehydrogenase -0.51
    15 GFF4647 no description -0.50
    16 GFF7283 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.50
    17 GFF7301 Glycogen phosphorylase (EC 2.4.1.1) -0.50
    18 GFF6677 regulatory protein -0.49
    19 GFF7019 ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) -0.49
    20 GFF4427 hypothetical protein -0.49

    Or look for positive cofitness