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  • Negative cofitness for GFF3970 from Variovorax sp. SCN45

    Ring hydroxylating dioxygenase, alpha subunit (EC 1.14.12.13)
    SEED: 3-phenylpropionate dioxygenase alpha subunit (EC 1.14.1.-)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3000 D-2-hydroxyglutarate dehydrogenase (EC 1.1.99.2) -0.60
    2 GFF2867 DNA recombination protein RmuC -0.58
    3 GFF3150 Transcriptional regulator, AsnC family -0.57
    4 GFF536 no description -0.57
    5 GFF4941 Gfa-like protein -0.57
    6 GFF3210 hypothetical protein -0.56
    7 GFF7113 hypothetical protein -0.54
    8 GFF5669 hypothetical protein -0.54
    9 GFF871 Vitamin B12 ABC transporter, substrate-binding protein BtuF -0.54
    10 GFF5833 Oxidoreductase, short-chain dehydrogenase/reductase family -0.54
    11 GFF2023 Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4) -0.53
    12 GFF2927 Peptidylprolyl isomerase, FKBP-type (EC 5.2.1.8) -0.53
    13 GFF3360 no description -0.53
    14 GFF1556 Tricarboxylate transport protein TctC -0.52
    15 GFF4313 2-dehydropantoate 2-reductase (EC 1.1.1.169) -0.51
    16 GFF4966 no description -0.51
    17 GFF5127 no description -0.51
    18 GFF4182 Extracytoplasmic function (ECF) sigma factor VreI -0.50
    19 GFF988 LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) -0.50
    20 GFF6977 Cytochrome b561 -0.50

    Or look for positive cofitness