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  • Negative cofitness for GFF3960 from Variovorax sp. SCN45

    3'-to-5' oligoribonuclease (orn)
    SEED: 3'-to-5' oligoribonuclease (orn)
    KEGG: oligoribonuclease

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3851 Uncharacterized MFS-type transporter -0.73
    2 GFF5021 Tripartite tricarboxylate transporter TctA family -0.70
    3 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) -0.66
    4 GFF3582 Tripartite tricarboxylate transporter TctC family -0.66
    5 GFF7373 CaiB/BaiF family protein -0.65
    6 GFF4783 Penicillin acylase (EC 3.5.1.11) -0.65
    7 GFF255 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC 2.3.1.117) -0.63
    8 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) -0.63
    9 GFF4807 Uncharacterized GST-like protein yncG -0.62
    10 GFF5840 hypothetical protein -0.62
    11 GFF5020 Tripartite tricarboxylate transporter TctB family -0.62
    12 GFF4397 hypothetical protein -0.62
    13 GFF4552 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) -0.62
    14 GFF2817 Probable proline-rich protein -0.61
    15 GFF1055 Fumarylacetoacetate hydrolase family protein -0.61
    16 GFF6139 Serine/threonine kinase -0.61
    17 GFF4799 hypothetical protein -0.61
    18 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) -0.61
    19 GFF4422 Conjugative transfer protein TrbG -0.60
    20 GFF6800 ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) -0.60

    Or look for positive cofitness