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  • Negative cofitness for GFF3954 from Variovorax sp. SCN45

    Similar to cobalamin biosynthesis protein CbiB
    SEED: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
    KEGG: adenosylcobinamide-phosphate synthase CobD

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF240 Cytosol aminopeptidase PepA (EC 3.4.11.1) -0.59
    2 GFF1119 Ribonuclease HI (EC 3.1.26.4) -0.58
    3 GFF2835 putative TonB-dependent receptor -0.57
    4 GFF5208 Efflux ABC transporter, permease/ATP-binding protein Reut_A2584 -0.57
    5 GFF2836 MotA/TolQ/ExbB proton channel family protein -0.56
    6 GFF1210 D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-) -0.55
    7 GFF1218 O-antigen acetylase -0.54
    8 GFF3624 Putative transmembrane protein -0.54
    9 GFF6210 ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) -0.54
    10 GFF525 Tripartite tricarboxylate transporter TctC family -0.52
    11 GFF649 no description -0.52
    12 GFF2734 DNA topoisomerase IV subunit B (EC 5.99.1.3) -0.50
    13 GFF6333 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) -0.50
    14 GFF494 RND efflux system, membrane fusion protein -0.49
    15 GFF6392 hypothetical protein -0.49
    16 GFF1571 Transcriptional regulator, LysR family -0.49
    17 GFF3008 hypothetical protein -0.49
    18 GFF3258 hypothetical protein -0.49
    19 GFF6146 Phosphonoacetate hydrolase (EC 3.11.1.2) -0.49
    20 GFF4955 hypothetical protein -0.49

    Or look for positive cofitness