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  • Negative cofitness for GFF3940 from Variovorax sp. SCN45

    putative membrane protein
    SEED: membrane protein, putative

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2646 Acetyl-CoA acetyltransferase -0.62
    2 GFF4815 Glucose-fructose oxidoreductase (EC 1.1.99.28) -0.58
    3 GFF1657 Nitronate monooxygenase (EC 1.13.12.16) -0.56
    4 GFF329 Nucleoside ABC transporter, ATP-binding protein -0.55
    5 GFF4503 RNA polymerase sigma factor -0.53
    6 GFF1864 Transcriptional regulator, LysR family -0.51
    7 GFF1719 Transcriptional regulator, LysR family -0.51
    8 GFF2052 hypothetical protein -0.50
    9 GFF6458 Lipid A 4'-phosphatase LpxF-like, putative -0.50
    10 GFF5683 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) -0.49
    11 GFF1320 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) -0.49
    12 GFF7278 Transposase -0.49
    13 GFF862 hypothetical protein -0.48
    14 GFF2706 VgrG protein -0.48
    15 GFF872 Hemin ABC transporter, permease protein -0.48
    16 GFF968 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) -0.48
    17 GFF7146 Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster -0.47
    18 GFF3471 hypothetical protein -0.47
    19 GFF1473 Amidase family protein BBta_1912 -0.46
    20 GFF6438 hypothetical protein -0.46

    Or look for positive cofitness