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  • Negative cofitness for GFF3939 from Variovorax sp. SCN45

    Hydrolase, HAD superfamily
    SEED: isochorismatase hydrolase
    KEGG: isochorismatase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2030 ABC-type branched-chain amino acid transport systems, periplasmic component -0.62
    2 GFF3470 Permease of the drug/metabolite transporter (DMT) superfamily -0.56
    3 GFF101 Phosphate-binding DING protein (related to PstS) -0.56
    4 GFF3584 hypothetical protein -0.55
    5 GFF1668 BUG/TctC family periplasmic protein -0.52
    6 GFF1049 low-specificity D-threonine aldolase -0.52
    7 GFF5127 no description -0.52
    8 GFF5372 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA -0.52
    9 GFF1419 Indolepyruvate oxidoreductase subunit IorA (EC 1.2.7.8) -0.50
    10 GFF2290 Chromosome partitioning protein ParA -0.50
    11 GFF2179 hypothetical protein -0.50
    12 GFF5912 Two-component transcriptional response regulator, LuxR family, but with unusual receiver domain -0.49
    13 GFF5843 hypothetical protein -0.49
    14 GFF3486 glutamine synthetase family protein -0.49
    15 GFF4774 Broad-specificity amino acid ABC transporter, ATP-binding protein 2 -0.49
    16 GFF1359 FMN-dependent NADH-azoreductase (EC 1.7.1.6) -0.48
    17 GFF6623 Esterase/lipase -0.48
    18 GFF6607 Plasmid replication initiator protein -0.48
    19 GFF3471 hypothetical protein -0.48
    20 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) -0.48

    Or look for positive cofitness