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  • Negative cofitness for GFF3921 from Variovorax sp. SCN45

    Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
    SEED: Tryptophan 2,3-dioxygenase (EC 1.13.11.11)
    KEGG: tryptophan 2,3-dioxygenase

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4628 hypothetical protein -0.62
    2 GFF1873 KEGG: LacI family transcriptional regulator -0.60
    3 GFF4038 Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family -0.59
    4 GFF1042 Glutathione S-transferase, unnamed subgroup 2 (EC 2.5.1.18) -0.53
    5 GFF2018 Transcriptional regulator, IclR family -0.53
    6 GFF3477 Phosphoprotein phosphatase -0.51
    7 GFF1767 no description -0.50
    8 GFF2904 hypothetical protein -0.50
    9 GFF6741 UPF0053 inner membrane protein YoaE -0.50
    10 GFF6263 Uncharacterized protein Atu0170, clustered with phosphonate utilization -0.50
    11 GFF2648 Transcriptional regulator, AraC family -0.50
    12 GFF6567 hypothetical protein -0.49
    13 GFF4439 Probable transmembrane protein -0.49
    14 GFF4063 Cytochrome c family protein -0.49
    15 GFF5115 Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE -0.49
    16 GFF7209 ABC transporter, substrate-binding protein (cluster 10, nitrate/sulfonate/bicarbonate) -0.48
    17 GFF4374 UPF0758 family protein -0.48
    18 GFF1875 no description -0.47
    19 GFF6666 Transcriptional regulator protein -0.47
    20 GFF2727 Outer membrane protein romA -0.46

    Or look for positive cofitness