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  • Negative cofitness for PS417_20050 from Pseudomonas simiae WCS417

    cobalamin biosynthesis protein CobD
    SEED: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
    KEGG: adenosylcobinamide-phosphate synthase CobD

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_02455 putative transporter, required for glycine utilization (from data) -0.26
    2 PS417_24950 hypothetical protein -0.26
    3 PS417_27810 ribonuclease PH -0.22
    4 PS417_28535 TonB-dependent receptor -0.22
    5 PS417_27615 ammonia channel protein -0.21
    6 PS417_23155 pilus assembly protein PilW -0.20
    7 PS417_10770 transglycosylase -0.20
    8 PS417_22350 Fis family transcriptional regulator -0.20
    9 PS417_04855 polysaccharide deacetylase -0.19
    10 PS417_21700 arginine N-succinyltransferase -0.19
    11 PS417_23785 sulfite oxidase -0.19
    12 PS417_11505 ion channel protein Tsx -0.18
    13 PS417_18755 CrtK -0.18
    14 PS417_05980 chemotaxis protein CheA -0.18
    15 PS417_01350 TonB-dependent receptor -0.18
    16 PS417_25085 hypothetical protein -0.18
    17 PS417_09850 hypothetical protein -0.18
    18 PS417_07915 relaxase -0.17
    19 PS417_11900 conjugal transfer protein TraR -0.17
    20 PS417_01640 histidine kinase -0.17

    Or look for positive cofitness