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  • Negative cofitness for GFF3911 from Variovorax sp. SCN45

    Putative phosphoesterase
    SEED: phosphoesterase, putative

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF5412 no description -0.62
    2 GFF33 Type IV pilus biogenesis protein PilZ -0.60
    3 GFF5322 Type IV pilus biogenesis protein PilP -0.59
    4 GFF5321 Type IV pilus biogenesis protein PilO -0.59
    5 GFF5490 Uncharacterized protein with LysM domain, COG1652 -0.59
    6 GFF2519 FIG016425: Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) -0.58
    7 GFF3886 Putative transmembrane protein -0.58
    8 GFF5417 hypothetical protein -0.58
    9 GFF3743 Twitching motility protein PilT -0.58
    10 GFF5323 Type IV pilus biogenesis protein PilQ -0.58
    11 GFF5418 Type IV fimbrial biogenesis protein PilY1 -0.58
    12 GFF5416 Type IV fimbrial biogenesis protein PilW -0.58
    13 GFF2510 Type IV fimbrial assembly, ATPase PilB -0.57
    14 GFF6075 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB -0.57
    15 GFF5415 Type IV fimbrial biogenesis protein PilV -0.57
    16 GFF5414 hypothetical protein -0.57
    17 GFF5419 Type IV pilus biogenesis protein PilE -0.57
    18 GFF3826 Response regulator receiver:LytTr DNA-binding region -0.57
    19 GFF3068 FIG00538108: hypothetical protein -0.57
    20 GFF5320 Type IV pilus biogenesis protein PilN -0.57

    Or look for positive cofitness