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  • Negative cofitness for GFF39 from Sphingobium sp. HT1-2

    Replication-associated recombination protein RarA
    SEED: FIG065221: Holliday junction DNA helicase
    KEGG: putative ATPase

    Computing cofitness values with 16 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2339 hypothetical protein -0.83
    2 GFF5216 Sodium-transporting ATPase subunit D -0.75
    3 GFF4030 hypothetical protein -0.74
    4 GFF4451 hypothetical protein -0.73
    5 GFF3926 hypothetical protein -0.73
    6 GFF3967 hypothetical protein -0.72
    7 GFF4797 hypothetical protein -0.71
    8 GFF926 L-carnitine dehydratase/bile acid-inducible protein F -0.70
    9 GFF4377 hypothetical protein -0.70
    10 GFF5134 ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD -0.70
    11 GFF4913 oxidoreductase, zinc-binding dehydrogenase family protein -0.69
    12 GFF2661 hypothetical protein -0.69
    13 GFF197 hypothetical protein -0.68
    14 GFF5415 FIG01095887: hypothetical protein -0.68
    15 GFF976 hypothetical protein -0.67
    16 GFF308 UPF0102 protein YraN -0.66
    17 GFF4372 Uncharacterized methyl transferase/DEAD-like helicase/Strawberry notch C-domain protein mlr9704 -0.66
    18 GFF1626 Tryptophan synthase beta chain (EC 4.2.1.20) -0.66
    19 GFF2721 CzcABC family efflux RND transporter, membrane fusion protein -0.66
    20 GFF4553 hypothetical protein -0.65

    Or look for positive cofitness