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  • Negative cofitness for GFF3886 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: Translation initiation factor 2
    KEGG: uncharacterized membrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF531 hypothetical protein -0.80
    2 GFF3917 Ferrous iron transporter FeoB -0.79
    3 GFF3893 hypothetical protein -0.78
    4 GFF2505 hypothetical protein -0.77
    5 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) -0.75
    6 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component -0.73
    7 GFF5860 no description -0.72
    8 GFF5429 Iron(III) dicitrate transport protein FecA -0.72
    9 GFF3931 Protein sirB1 -0.71
    10 GFF5855 T1SS secreted agglutinin RTX -0.70
    11 GFF2152 twitching motility protein PilH -0.68
    12 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase -0.68
    13 GFF5288 Uncharacterized protein PA4513 -0.67
    14 GFF375 hypothetical protein -0.67
    15 GFF3877 Uncharacterized chaperone protein YegD -0.67
    16 GFF971 NLP/P60 protein -0.66
    17 GFF3920 FIG00467295: hypothetical protein -0.65
    18 GFF3906 Acyl-CoA dehydrogenase -0.64
    19 GFF2354 FIG00555615: hypothetical protein -0.64
    20 GFF6698 ClpXP protease specificity-enhancing factor SspB -0.64

    Or look for positive cofitness