Negative cofitness for GFF3885 from Variovorax sp. SCN45

tRNA pseudouridine(38-40) synthase (EC 5.4.99.12)
SEED: tRNA pseudouridine synthase A (EC 4.2.1.70)
KEGG: tRNA pseudouridine synthase A

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF5668 Uncharacterized MFS-type transporter -0.74
2 GFF4783 Penicillin acylase (EC 3.5.1.11) -0.70
3 GFF5598 putative phospholipase D family protein -0.68
4 GFF5402 Transcriptional regulator, IclR family -0.66
5 GFF770 Limit dextrin alpha-1,6-maltotetraose-hydrolase (EC 3.2.1.196) -0.66
6 GFF6474 hypothetical protein -0.64
7 GFF6111 Oligopeptide ABC transporter, ATP-binding protein OppF (TC 3.A.1.5.1) -0.64
8 GFF2242 no description -0.63
9 GFF4238 no description -0.62
10 GFF305 uncharacterized domain / RidA/YER057c/UK114 superfamily, group 5 -0.62
11 GFF2683 Protein containing domains DUF404, DUF407 -0.61
12 GFF4067 FIG00897050: hypothetical protein -0.61
13 GFF5948 hypothetical protein -0.61
14 GFF6424 Phosphoenolpyruvate carboxykinase [GTP] (EC 4.1.1.32) -0.60
15 GFF6042 Fatty acid desaturase (EC 1.14.19.1); Delta-9 fatty acid desaturase (EC 1.14.19.1) -0.60
16 GFF6876 Aminotransferase, DegT/DnrJ/EryC1/StrS family -0.59
17 GFF6278 Ferredoxin-dependent glutamate synthase (EC 1.4.7.1) -0.59
18 GFF6125 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) -0.59
19 GFF6748 Undecaprenyl-diphosphatase BcrC (EC 3.6.1.27), conveys bacitracin resistance -0.59
20 GFF1268 FIG022199: FAD-binding protein -0.59

Or look for positive cofitness