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  • Negative cofitness for GFF3869 from Variovorax sp. SCN45

    Putative transmembrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF420 Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) -0.62
    2 GFF7358 Phenylacetate ABC transporter, permease protein 2 -0.59
    3 GFF6417 BUG/TctC family periplasmic protein -0.59
    4 GFF5441 4-carboxymuconolactone decarboxylase domain/alkylhydroperoxidase AhpD family core domain protein -0.58
    5 GFF1509 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) -0.58
    6 GFF3931 Protein sirB1 -0.57
    7 GFF3836 Cyclic beta-1,2-glucan synthase (EC 2.4.1.-) -0.55
    8 GFF1316 Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12) -0.55
    9 GFF5014 Acyl-CoA dehydrogenase -0.55
    10 GFF5855 T1SS secreted agglutinin RTX -0.54
    11 GFF4393 Uncharacterized ABC1 family protein XCC_1720 -0.53
    12 GFF7053 Transcriptional regulator, LysR family -0.53
    13 GFF7378 protein of unknown function DUF1311 -0.53
    14 GFF4415 Conjugative transfer protein TrbC -0.53
    15 GFF1219 SAM-dependent methyltransferase -0.52
    16 GFF1313 Cellulose synthase operon protein C -0.52
    17 GFF5860 no description -0.52
    18 GFF7134 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) -0.52
    19 GFF2521 FIG00931781: hypothetical protein -0.50
    20 GFF794 KEGG: RNA polymerase sigma-70 factor, ECF subfamily -0.50

    Or look for positive cofitness