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  • Negative cofitness for GFF3864 from Variovorax sp. SCN45

    Sigma factor RpoE negative regulatory protein RseA
    SEED: Sigma factor RpoE negative regulatory protein RseA
    KEGG: sigma-E factor negative regulatory protein RseA

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2504 Cell division protein ZapD -0.64
    2 GFF3667 Uncharacterized MFS-type transporter -0.63
    3 GFF3798 FIG00932573: hypothetical protein -0.60
    4 GFF2990 Probable hydrolase protein (EC 3.-.-.-) -0.59
    5 GFF592 Glutamyl-Q tRNA(Asp) synthetase -0.59
    6 GFF6572 Conjugative transfer protein TrbG -0.59
    7 GFF5586 Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190) -0.56
    8 GFF4983 fumarate reductase/succinate dehydrogenase flavoprotein-like -0.55
    9 GFF4928 hypothetical protein -0.54
    10 GFF4256 Vanillate O-demethylase oxygenase subunit (EC 1.14.13.82) -0.54
    11 GFF3582 Tripartite tricarboxylate transporter TctC family -0.54
    12 GFF3730 Integral membrane protein -0.53
    13 GFF7260 hypothetical protein -0.53
    14 GFF2263 putative membrane protein -0.52
    15 GFF3707 ABC transporter, permease protein 1 (cluster 11, riboflavin/purine nucleoside/unknown) -0.51
    16 GFF3830 Uncharacterized MFS-type transporter -0.51
    17 GFF1444 PRC-barrel -0.50
    18 GFF581 Tricarboxylate transport transcriptional regulator TctD -0.50
    19 GFF4117 Translation elongation factor Tu -0.50
    20 GFF2622 Putative transport protein -0.50

    Or look for positive cofitness