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  • Negative cofitness for PS417_01955 from Pseudomonas simiae WCS417

    peptidase
    SEED: Multimodular transpeptidase-transglycosylase (EC 2.4.1.129) (EC 3.4.-.-)
    KEGG: penicillin-binding protein 1A

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_15695 molybdenum cofactor biosynthesis protein A -0.52
    2 PS417_26875 histidine kinase -0.51
    3 PS417_27655 LysR family transcriptional regulator -0.46
    4 PS417_15715 nitrate reductase -0.44
    5 PS417_17170 carbon-nitrogen hydrolase -0.44
    6 PS417_20165 hypothetical protein -0.43
    7 PS417_15710 nitrate reductase -0.40
    8 PS417_15690 ribonucleoside-triphosphate reductase -0.38
    9 PS417_27560 adenylate cyclase -0.37
    10 PS417_22550 ATP-binding protein -0.36
    11 PS417_28250 cell wall assembly protein -0.35
    12 PS417_25970 diguanylate cyclase -0.34
    13 PS417_02835 branched-chain amino acid ABC transporter substrate-binding protein -0.33
    14 PS417_19220 hypothetical protein -0.32
    15 PS417_20215 nitrate reductase -0.31
    16 PS417_20325 hypothetical protein -0.30
    17 PS417_20195 sodium:solute symporter -0.29
    18 PS417_20360 serine/threonine protein phosphatase -0.28
    19 PS417_07380 hypothetical protein -0.28
    20 PS417_04675 deoxyribonuclease -0.28

    Or look for positive cofitness