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  • Negative cofitness for GFF3799 from Sphingobium sp. HT1-2

    Outer membrane factor (OMF) lipoprotein associated wth EmrAB-OMF efflux system
    SEED: Outer membrane component of tripartite multidrug resistance system

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF494 GAF domain/GGDEF domain/EAL domain protein -0.85
    2 GFF2723 Two-component transcriptional response regulator, OmpR family -0.83
    3 GFF3535 Sulfate permease -0.79
    4 GFF3548 hypothetical protein -0.78
    5 GFF4003 hypothetical protein -0.78
    6 GFF723 Cyclopropane-fatty-acyl-phospholipid synthase (EC 2.1.1.79) -0.77
    7 GFF1380 Methylsuccinyl-CoA dehydrogenase, predicted by (Erb et al, 2007) -0.76
    8 GFF4809 hypothetical protein -0.76
    9 GFF4753 Resolvase, N-terminal domain -0.74
    10 GFF4778 Uncharacterized UPF0118 membrane protein -0.74
    11 GFF1669 hypothetical protein -0.74
    12 GFF5228 Ribose-phosphate pyrophosphokinase, possible alternative form 2 -0.73
    13 GFF2620 hypothetical protein -0.73
    14 GFF2194 hypothetical protein -0.72
    15 GFF3958 hypothetical protein -0.72
    16 GFF466 D-alanine--D-alanine ligase (EC 6.3.2.4) -0.72
    17 GFF4990 FIG01129245: hypothetical protein -0.71
    18 GFF3859 Domain of unknown function DUF1801 -0.71
    19 GFF3118 Sensory box histidine kinase/response regulator -0.71
    20 GFF1866 Permease of the drug/metabolite transporter (DMT) superfamily -0.70

    Or look for positive cofitness