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  • Negative cofitness for GFF3798 from Variovorax sp. SCN45

    FIG00932573: hypothetical protein
    SEED: FIG00932573: hypothetical protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6560 no description -0.62
    2 GFF3466 FIG00932805: hypothetical protein -0.60
    3 GFF3864 Sigma factor RpoE negative regulatory protein RseA -0.60
    4 GFF5618 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.55
    5 GFF2756 Ribosylnicotinamide kinase (EC 2.7.1.22) -0.54
    6 GFF5535 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC 2.4.99.17) -0.54
    7 GFF263 Secreted and surface protein containing fasciclin-like repeats -0.53
    8 GFF1370 Transcriptional regulator associated with Tricarboxylic transport -0.53
    9 GFF1790 Hydroxymethylpyrimidine ABC transporter, ATPase component -0.53
    10 GFF2796 Dihydrodipicolinate synthase family protein PP2639 -0.52
    11 GFF4309 Branched-chain amino acid ABC transporter, ATP-binding protein LivF (TC 3.A.1.4.1) -0.52
    12 GFF7216 hypothetical protein -0.51
    13 GFF2229 Pca regulon regulatory protein PcaR -0.51
    14 GFF1088 Putative hemolysin -0.50
    15 GFF4662 no description -0.50
    16 GFF4376 UPF0380 proteins YafZ and homologs -0.50
    17 GFF3241 hypothetical protein -0.50
    18 GFF1404 hypothetical protein -0.50
    19 GFF2500 Mutator MutT protein (7,8-dihydro-8-oxoguanine-triphosphatase) (EC 3.6.1.-) -0.49
    20 GFF1954 no description -0.49

    Or look for positive cofitness