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  • Negative cofitness for PS417_19375 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: LysR family transcriptional regulator clustered with dicarboxylate transport

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_06645 RNA polymerase-associated protein RapA -0.25
    2 PS417_23810 acetolactate synthase 3 catalytic subunit -0.25
    3 PS417_26995 phosphoserine phosphatase -0.25
    4 PS417_26890 dihydroxy-acid dehydratase -0.25
    5 PS417_12855 3-phosphoshikimate 1-carboxyvinyltransferase -0.25
    6 PS417_26740 homoserine acetyltransferase -0.25
    7 PS417_18590 SAM-dependent methyltransferase -0.24
    8 PS417_18690 aromatic amino acid aminotransferase -0.24
    9 PS417_06915 hypothetical protein -0.24
    10 PS417_23800 ketol-acid reductoisomerase -0.24
    11 PS417_01565 imidazole glycerol phosphate synthase -0.24
    12 PS417_25710 indole-3-glycerol-phosphate synthase -0.23
    13 PS417_20620 glycosyl transferase family 2 -0.23
    14 PS417_26745 methionine biosynthesis protein MetW -0.23
    15 PS417_05595 ornithine carbamoyltransferase -0.23
    16 PS417_27010 threonine dehydratase -0.23
    17 PS417_27835 endoribonuclease -0.22
    18 PS417_23805 acetolactate synthase 3 regulatory subunit -0.22
    19 PS417_02510 ATP phosphoribosyltransferase regulatory subunit -0.22
    20 PS417_23110 2-isopropylmalate synthase -0.22

    Or look for positive cofitness