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  • Negative cofitness for GFF3784 from Variovorax sp. SCN45

    ABC transporter, substrate-binding protein RSc1750
    SEED: Branched-chain amino acid ABC transporter, amino acid-binding protein (TC 3.A.1.4.1)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF2431 RNA polymerase ECF-type sigma factor -0.54
    2 GFF3759 Uridine kinase family protein YggC homolog -0.52
    3 GFF6647 Two-component transcriptional response regulator, LuxR family -0.49
    4 GFF7027 no description -0.47
    5 GFF4423 Conjugative transfer protein TrbI -0.47
    6 GFF2883 CaiB/BaiF family protein -0.47
    7 GFF6472 membrane efflux protein -0.46
    8 GFF6810 no description -0.45
    9 GFF2774 Auxin efflux carrier family protein -0.44
    10 GFF7323 Transcriptional response regulatory protein GlrR -0.44
    11 GFF3750 no description -0.44
    12 GFF6082 MoxR-like ATPase in aerotolerance operon -0.44
    13 GFF1493 BUG/TctC family periplasmic protein -0.43
    14 GFF1315 Cyclic di-GMP-binding protein BcsB -0.43
    15 GFF6566 hypothetical protein -0.43
    16 GFF6766 MATE efflux family protein -0.43
    17 GFF201 Probable ferredoxin oxidoreductase oxidoreductase protein (EC 1.-.-.- ) -0.42
    18 GFF1210 D-aminopeptidase dipeptide-binding protein DppA (EC 3.4.11.-) -0.42
    19 GFF7116 2,3-dihydroxybiphenyl 1,2-dioxygenase (EC 1.13.11.39) -0.41
    20 GFF1056 hypothetical protein -0.41

    Or look for positive cofitness