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  • Negative cofitness for GFF3749 from Sphingobium sp. HT1-2

    7-cyano-7-deazaguanine synthase (EC 6.3.4.20)
    SEED: Queuosine Biosynthesis QueC ATPase
    KEGG: queuosine biosynthesis protein QueC

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF945 Protein containing domains DUF404, DUF407, DUF403 -0.80
    2 GFF4047 RNA polymerase ECF-type sigma factor -0.75
    3 GFF1892 Nucleoside-diphosphate-sugar epimerase -0.73
    4 GFF3686 Transcriptional regulator, LysR family -0.72
    5 GFF4760 tRNA-modifying protein YgfZ -0.71
    6 GFF4314 IncF plasmid conjugative transfer pilus assembly protein TraK -0.71
    7 GFF2075 hypothetical protein -0.70
    8 GFF2125 hypothetical protein -0.70
    9 GFF4294 DNA-binding protein HU-beta -0.69
    10 GFF4180 long chain fatty acid transport protein -0.69
    11 GFF4134 hypothetical protein -0.69
    12 GFF3227 hypothetical protein -0.67
    13 GFF3863 putative oxidoreductase, nitronate monooxygenase family -0.67
    14 GFF750 Ribosomal silencing factor RsfA -0.67
    15 GFF241 hypothetical protein -0.66
    16 GFF191 Conjugative transfer protein TrbE -0.66
    17 GFF3830 hypothetical protein -0.66
    18 GFF819 RNA binding S1 domain protein -0.65
    19 GFF1944 hypothetical protein -0.65
    20 GFF4152 Pyridoxal phosphate-containing protein YggS -0.65

    Or look for positive cofitness