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  • Negative cofitness for GFF3743 from Variovorax sp. SCN45

    Twitching motility protein PilT
    SEED: Twitching motility protein PilT
    KEGG: twitching motility protein PilT

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3917 Ferrous iron transporter FeoB -0.80
    2 GFF531 hypothetical protein -0.77
    3 GFF6532 Phosphoglucomutase (EC 5.4.2.2) @ Phosphomannomutase (EC 5.4.2.8) -0.77
    4 GFF2505 hypothetical protein -0.77
    5 GFF5860 no description -0.77
    6 GFF3893 hypothetical protein -0.76
    7 GFF2506 Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) -0.75
    8 GFF5429 Iron(III) dicitrate transport protein FecA -0.74
    9 GFF5002 ABC-type branched-chain amino acid transport systems, periplasmic component -0.74
    10 GFF969 ATP-dependent protease HslVU (ClpYQ), peptidase subunit -0.74
    11 GFF375 hypothetical protein -0.73
    12 GFF971 NLP/P60 protein -0.69
    13 GFF975 4-hydroxyphenylacetate 3-monooxygenase (EC 1.14.14.9) -0.68
    14 GFF6392 hypothetical protein -0.68
    15 GFF3877 Uncharacterized chaperone protein YegD -0.67
    16 GFF5408 Protein serine/threonine phosphatase PrpC, regulation of stationary phase -0.66
    17 GFF2354 FIG00555615: hypothetical protein -0.66
    18 GFF5855 T1SS secreted agglutinin RTX -0.65
    19 GFF3931 Protein sirB1 -0.63
    20 GFF3247 FIG027190: Putative transmembrane protein -0.61

    Or look for positive cofitness