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  • Negative cofitness for PS417_19135 from Pseudomonas simiae WCS417

    DeoR faimly transcriptional regulator
    SEED: GGDEF domain protein

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_03260 5S ribosomal RNA -0.24
    2 PS417_01340 agmatine deiminase -0.23
    3 PS417_08170 capsular biosynthesis protein -0.23
    4 PS417_03005 arginine decarboxylase -0.22
    5 PS417_11705 cyclic peptide transporter -0.21
    6 PS417_02485 tRNA delta(2)-isopentenylpyrophosphate transferase -0.21
    7 PS417_22535 ornithine acetyltransferase -0.21
    8 PS417_06150 SAM-dependent methlyltransferase -0.21
    9 PS417_16555 cupin -0.21
    10 PS417_15250 DNA repair protein -0.21
    11 PS417_27245 aminotransferase DegT -0.21
    12 PS417_24500 DEAD/DEAH box helicase -0.20
    13 PS417_21560 flagellar basal body rod modification protein FlgD -0.20
    14 PS417_21585 flagellar basal body P-ring biosynthesis protein FlgA -0.20
    15 PS417_19695 flagellar biosynthesis sigma factor -0.20
    16 PS417_26370 RNA helicase -0.19
    17 PS417_22565 formyltetrahydrofolate deformylase -0.19
    18 PS417_19730 flagellar biosynthesis protein FliR -0.19
    19 PS417_04295 peptidase PmbA -0.19
    20 PS417_19785 flagellar biogenesis protein -0.19

    Or look for positive cofitness