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  • Negative cofitness for GFF3722 from Sphingobium sp. HT1-2

    RNA polymerase sigma factor for flagellar operon
    SEED: RNA polymerase sigma factor for flagellar operon
    KEGG: RNA polymerase sigma factor for flagellar operon FliA

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF3991 hypothetical protein -0.76
    2 GFF3103 DNA polymerase-like protein PA0670 -0.75
    3 GFF1189 Gamma-glutamyltranspeptidase (EC 2.3.2.2) @ Glutathione hydrolase (EC 3.4.19.13) -0.71
    4 GFF1218 Cellulose synthase catalytic subunit [UDP-forming] (EC 2.4.1.12) -0.70
    5 GFF21 hypothetical protein -0.70
    6 GFF2585 Two-component system sensor histidine kinase/response regulator hybrid -0.69
    7 GFF1483 hypothetical protein -0.67
    8 GFF858 putative multi-domain protein -0.67
    9 GFF5274 TonB-dependent receptor -0.67
    10 GFF3781 Class A beta-lactamase (EC 3.5.2.6) -0.67
    11 GFF3680 hypothetical protein -0.67
    12 GFF4345 UspA -0.66
    13 GFF2622 Oxygen-independent coproporphyrinogen-III oxidase-like protein YggW -0.65
    14 GFF4928 diterpenoid dioxygenase -0.65
    15 GFF1825 Two-component transcriptional response regulator, NarL/FixJ family -0.64
    16 GFF3664 hypothetical protein -0.64
    17 GFF2058 Protein yceI precursor -0.64
    18 GFF3824 hypothetical protein -0.63
    19 GFF3014 hypothetical protein -0.63
    20 GFF844 hypothetical protein -0.62

    Or look for positive cofitness