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  • Negative cofitness for GFF3718 from Variovorax sp. SCN45

    Peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB (EC 3.5.1.110)
    SEED: Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway
    KEGG: putative isochorismatase family protein RutB

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4877 no description -0.70
    2 GFF1788 hypothetical protein -0.60
    3 GFF4553 RNA chaperone ProQ -0.60
    4 GFF7411 no description -0.59
    5 GFF2072 Phosphate starvation-inducible protein PhoH, predicted ATPase -0.59
    6 GFF89 hypothetical protein -0.58
    7 GFF2763 33 kDa chaperonin HslO -0.58
    8 GFF289 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 -0.58
    9 GFF3797 Ammonia monooxygenase -0.57
    10 GFF2905 surface antigen gene -0.57
    11 GFF924 hypothetical protein -0.57
    12 GFF3075 Surface antigen -0.57
    13 GFF4095 no description -0.57
    14 GFF1051 no description -0.57
    15 GFF6887 Transporter, LysE family -0.56
    16 GFF4840 FIG00956188: hypothetical protein -0.56
    17 GFF6708 ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) -0.55
    18 GFF699 ABC transporter, ATP-binding protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) -0.55
    19 GFF5194 L-arabinose ABC transporter, substrate-binding protein AraF -0.54
    20 GFF1029 CHRD domain containing protein -0.54

    Or look for positive cofitness