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  • Negative cofitness for PS417_19010 from Pseudomonas simiae WCS417

    LysR family transcriptional regulator
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_20685 CAAX protease -0.24
    2 PS417_06525 beta-lactamase -0.22
    3 PS417_14935 transposase -0.22
    4 PS417_27305 5-formyltetrahydrofolate cyclo-ligase -0.22
    5 PS417_13605 short-chain dehydrogenase -0.21
    6 PS417_00625 taurine dioxygenase -0.21
    7 PS417_12805 glycogen branching protein -0.21
    8 PS417_02270 carbamoyltransferase -0.20
    9 PS417_04820 poly(beta-D-mannuronate) C5 epimerase -0.20
    10 PS417_15495 FAD-dependent oxidoreductase -0.20
    11 PS417_01790 glucan biosynthesis protein G -0.19
    12 PS417_20660 hypothetical protein -0.19
    13 PS417_04960 hypothetical protein -0.19
    14 PS417_19835 flagellar biosynthesis protein FliS -0.19
    15 PS417_27515 heme biosynthesis protein HemY -0.19
    16 PS417_04430 uracil transporter -0.19
    17 PS417_13350 phytanoyl-CoA dioxygenase -0.18
    18 PS417_22410 hypothetical protein -0.18
    19 PS417_20670 glycosyl transferase family 2 -0.18
    20 PS417_19850 branched-chain alpha-keto acid dehydrogenase subunit E2 -0.18

    Or look for positive cofitness