• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for PS417_18980 from Pseudomonas simiae WCS417

    3-methyl-2-oxobutanoate hydroxymethyltransferase
    SEED: 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC 2.1.2.11)
    KEGG: 3-methyl-2-oxobutanoate hydroxymethyltransferase

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_19760 flagellar basal body protein FliL -0.23
    2 PS417_01450 integrase -0.23
    3 PS417_08825 TetR family transcriptional regulator -0.22
    4 PS417_12375 serine/threonine protein phosphatase -0.21
    5 PS417_13835 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) -0.21
    6 PS417_27335 flagellar basal body protein FliL -0.20
    7 PS417_20335 hypothetical protein -0.20
    8 PS417_26650 histidine kinase -0.20
    9 PS417_16880 deaminase/reductase -0.19
    10 PS417_20685 CAAX protease -0.19
    11 PS417_08540 RNA helicase -0.19
    12 PS417_07760 hypothetical protein -0.19
    13 PS417_22520 histidine kinase -0.18
    14 PS417_24155 ATP-binding protein -0.18
    15 PS417_00835 hypothetical protein -0.18
    16 PS417_05795 lysozyme -0.18
    17 PS417_12640 GNAT family acetyltransferase -0.17
    18 PS417_16100 antibiotic biosynthesis monooxygenase -0.17
    19 PS417_06645 RNA polymerase-associated protein RapA -0.17
    20 PS417_22265 chromosome segregation protein ScpA -0.17

    Or look for positive cofitness