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  • Negative cofitness for GFF3697 from Variovorax sp. SCN45

    ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    SEED: ATP-dependent DNA ligase (EC 6.5.1.1) LigC
    KEGG: DNA ligase (ATP)

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4694 no description -0.55
    2 GFF7333 Transcriptional regulator, MerR family -0.52
    3 GFF1691 Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake -0.51
    4 GFF3040 hypothetical protein -0.51
    5 GFF5360 Putative transmembrane protein -0.51
    6 GFF4720 Putrescine transport system permease protein potI -0.50
    7 GFF6016 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) -0.49
    8 GFF617 no description -0.49
    9 GFF4203 Acetyl-CoA synthetase (ADP-forming) alpha and beta chains, putative -0.49
    10 GFF2418 BUG/TctC family periplasmic protein -0.48
    11 GFF5403 no description -0.48
    12 GFF4087 Cystathionine beta-lyase (EC 4.4.1.8) -0.48
    13 GFF1474 Transcriptional regulator, LysR family -0.47
    14 GFF2481 Urease accessory protein UreF -0.46
    15 GFF3204 no description -0.45
    16 GFF172 hypothetical protein -0.44
    17 GFF4244 Acid phosphatase (EC 3.1.3.2) -0.44
    18 GFF5831 Ketosteroid isomerase-related protein -0.43
    19 GFF7080 no description -0.43
    20 GFF4742 ABC transporter, substrate-binding protein RSc1750 -0.43

    Or look for positive cofitness