• Private Fitness
  • Home
  • Find Gene
  • BLAST
  • Experiments
  • Organisms
  • Help
  • Gene
  • Fitness
  • Nearby
  • Cofit
  • Protein
  • Homologs
  • Negative cofitness for GFF3690 from Variovorax sp. SCN45

    ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose) / ABC transporter, ATP-binding protein (cluster 2, ribose/xylose/arabinose/galactose)
    SEED: Ribose ABC transport system, ATP-binding protein RbsA (TC 3.A.1.2.1)
    KEGG: ribose transport system ATP-binding protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6450 Ethanolamine ammonia-lyase heavy chain (EC 4.3.1.7) -0.48
    2 GFF4544 RNA polymerase sigma factor RpoE -0.47
    3 GFF1688 FIG00828468: hypothetical protein -0.47
    4 GFF6243 Ku domain protein -0.47
    5 GFF7100 similar to protocatechuate 4,5-dioxygenase beta chain -0.46
    6 GFF4223 BUG/TctC family periplasmic protein -0.46
    7 GFF1317 no description -0.45
    8 GFF6566 hypothetical protein -0.45
    9 GFF3555 Mg-chelatase subunit ChlD -0.45
    10 GFF5789 YciO protein, TsaC/YrdC paralog -0.45
    11 GFF67 Glycosyl transferase, group 1 -0.45
    12 GFF2318 Transcriptional regulator ArgP, LysR family -0.45
    13 GFF1392 Monooxygenase, flavin-binding family -0.44
    14 GFF5108 FIG00348319: hypothetical protein -0.44
    15 GFF5930 VgrG protein -0.43
    16 GFF5387 Two-component system histidine kinase BP2548 -0.43
    17 GFF1660 Type IV fimbrial biogenesis protein PilY1 -0.43
    18 GFF4171 hypothetical protein -0.42
    19 GFF4906 hypothetical protein -0.41
    20 GFF1119 Ribonuclease HI (EC 3.1.26.4) -0.41

    Or look for positive cofitness