Negative cofitness for GFF3659 from Variovorax sp. SCN45

Two-component transcriptional response regulator, OmpR family
SEED: Phosphate regulon transcriptional regulatory protein PhoB (SphR)
KEGG: two-component system, OmpR family, response regulator RpaB

Computing cofitness values with 61 experiments...

Genes with the strongest negative cofitness:

Rank Hit Name Description Cofit  
1 GFF4099 Ser/Thr protein phosphatase family protein -0.60
2 GFF580 Rhodanese domain protein UPF0176, Betaproteobacterial subgroup -0.57
3 GFF5546 Lactam utilization protein LamB -0.56
4 GFF4490 Site-specific tyrosine recombinase XerC -0.55
5 GFF7257 KEGG: LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor -0.54
6 GFF2136 Ribokinase (EC 2.7.1.15) -0.52
7 GFF1476 hypothetical protein -0.51
8 GFF1365 no description -0.51
9 GFF5482 Leucine-responsive regulatory protein, regulator for leucine (or lrp) regulon and high-affinity branched-chain amino acid transport system -0.50
10 GFF3340 FIG00932469: hypothetical protein -0.50
11 GFF4678 FIG00348290: hypothetical protein -0.50
12 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase -0.49
13 GFF836 Vitamin B12 ABC transporter, substrate-binding protein BtuF -0.49
14 GFF216 Transmembrane regulator protein PrtR -0.48
15 GFF1239 Two-component system sensor histidine kinase -0.48
16 GFF7277 Mobile element protein -0.48
17 GFF3138 VgrG protein -0.48
18 GFF2016 hypothetical protein -0.47
19 GFF1501 hypothetical protein -0.47
20 GFF5729 Methyl-accepting chemotaxis sensor/transducer protein -0.47

Or look for positive cofitness