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  • Negative cofitness for GFF3652 from Sphingobium sp. HT1-2

    Two-component transcriptional response regulator, OmpR family
    SEED: response regulator in two-component regulatory system with PhoQ
    KEGG: two-component system, OmpR family, response regulator

    Computing cofitness values with 18 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF906 TonB-dependent receptor -0.80
    2 GFF888 Acetoin dehydrogenase E1 component beta-subunit (EC 2.3.1.190) -0.77
    3 GFF2620 hypothetical protein -0.77
    4 GFF4072 ADP-ribose pyrophosphatase of COG1058 family (EC 3.6.1.13) -0.76
    5 GFF4778 Uncharacterized UPF0118 membrane protein -0.76
    6 GFF494 GAF domain/GGDEF domain/EAL domain protein -0.76
    7 GFF3214 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62) -0.74
    8 GFF3790 hypothetical protein -0.74
    9 GFF3015 Microsomal dipeptidase (EC 3.4.13.19) -0.73
    10 GFF2794 hypothetical protein -0.73
    11 GFF1669 hypothetical protein -0.72
    12 GFF4921 dioxygenase, TauD/TfdA family -0.72
    13 GFF3490 L,D-transpeptidase -0.72
    14 GFF1404 Enoyl-CoA hydratase (EC 4.2.1.17) -0.70
    15 GFF1656 Proline dipeptidase -0.68
    16 GFF869 Cation:proton antiporter -0.68
    17 GFF18 hypothetical protein -0.68
    18 GFF2905 Cysteine synthase (EC 2.5.1.47) -0.68
    19 GFF191 Conjugative transfer protein TrbE -0.67
    20 GFF4854 Error-prone repair homolog of DNA polymerase III alpha subunit (EC 2.7.7.7) -0.67

    Or look for positive cofitness