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  • Negative cofitness for GFF3651 from Variovorax sp. SCN45

    PTS system, IIA component
    SEED: PTS system, fructose-specific IIA component
    KEGG: PTS system, ascorbate-specific IIA component

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF4552 Nitrilotriacetate monooxygenase component B (EC 1.14.13.-) -0.44
    2 GFF5442 Septum-associated rare lipoprotein A -0.44
    3 GFF5838 Probable signal peptide protein precursor -0.42
    4 GFF5337 Outer-membrane-phospholipid-binding lipoprotein MlaA -0.41
    5 GFF3877 Uncharacterized chaperone protein YegD -0.39
    6 GFF3931 Protein sirB1 -0.39
    7 GFF3851 Uncharacterized MFS-type transporter -0.39
    8 GFF6400 N-formylglutamate deformylase (EC 3.5.1.68) -0.39
    9 GFF4375 FIG00463055: hypothetical protein -0.38
    10 GFF6315 Pyrophosphate-dependent fructose 6-phosphate-1-kinase (EC 2.7.1.90) -0.36
    11 GFF5021 Tripartite tricarboxylate transporter TctA family -0.36
    12 GFF4715 Fatty acid hydroxylase family (carotene hydroxylase/sterol desaturase) -0.36
    13 GFF3862 hypothetical protein -0.36
    14 GFF6390 GtrA-like protein -0.36
    15 GFF435 hypothetical protein -0.35
    16 GFF2566 AsmA -0.35
    17 GFF4807 Uncharacterized GST-like protein yncG -0.34
    18 GFF5774 RNA polymerase sigma factor for flagellar operon -0.33
    19 GFF7288 Dipeptide ABC transporter, substrate-binding protein DppA (TC 3.A.1.5.2) -0.33
    20 GFF6395 hypothetical protein -0.33

    Or look for positive cofitness