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  • Negative cofitness for PS417_18595 from Pseudomonas simiae WCS417

    3-isopropylmalate dehydratase
    SEED: 3-isopropylmalate dehydratase small subunit (EC 4.2.1.33)
    KEGG: 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit

    Computing cofitness values with 552 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 PS417_09585 acetyltransferase -0.40
    2 PS417_09620 lipopolysaccharide biosynthesis protein -0.40
    3 PS417_09615 glycosyl transferase family 1 -0.38
    4 PS417_26875 histidine kinase -0.37
    5 PS417_26125 glutathione S-transferase -0.37
    6 PS417_09600 glycosyl transferase family 1 -0.36
    7 PS417_09590 membrane protein -0.34
    8 PS417_08920 branched-chain amino acid ABC transporter substrate-binding protein -0.33
    9 PS417_09635 mannose-1-phosphate guanylyltransferase -0.33
    10 PS417_26775 thiazole synthase -0.33
    11 PS417_26320 ABC transporter permease -0.32
    12 PS417_21105 aminodeoxychorismate synthase -0.31
    13 PS417_09595 membrane protein -0.31
    14 PS417_09645 TonB-dependent receptor -0.31
    15 PS417_19350 GTP cyclohydrolase -0.30
    16 PS417_25970 diguanylate cyclase -0.30
    17 PS417_24600 hydrogenase -0.30
    18 PS417_28250 cell wall assembly protein -0.29
    19 PS417_01820 chemotaxis protein -0.29
    20 PS417_15695 molybdenum cofactor biosynthesis protein A -0.29

    Or look for positive cofitness