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  • Negative cofitness for GFF3624 from Variovorax sp. SCN45

    Putative transmembrane protein
    SEED: Probable transmembrane protein

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6899 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) -0.83
    2 GFF6898 hypothetical protein -0.81
    3 GFF6900 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) -0.75
    4 GFF3813 no description -0.60
    5 GFF6901 no description -0.59
    6 GFF6946 Sensory box histidine kinase/response regulator -0.58
    7 GFF6945 Two-component transcriptional response regulator, OmpR family -0.57
    8 GFF3954 Similar to cobalamin biosynthesis protein CbiB -0.54
    9 GFF3272 Inner membrane protein, KefB/KefC family -0.52
    10 GFF963 Oligopeptidase A (EC 3.4.24.70) -0.52
    11 GFF3812 Bis-ABC ATPase Uup -0.50
    12 GFF1834 BUG/TctC family periplasmic protein -0.50
    13 GFF5020 Tripartite tricarboxylate transporter TctB family -0.49
    14 GFF5445 FIG003879: Uncharacterized subgroup of the nitrilase superfamily -0.47
    15 GFF6037 Transcriptional regulator, Crp/Fnr family -0.46
    16 GFF3902 Trans-aconitate 2-methyltransferase (EC 2.1.1.144) -0.46
    17 GFF3909 Aconitate hydratase (EC 4.2.1.3) -0.44
    18 GFF986 DinG family ATP-dependent helicase YoaA -0.43
    19 GFF7179 Xaa-Pro aminopeptidase (EC 3.4.11.9) -0.43
    20 GFF6886 DNA-binding transcriptional regulator, MocR family / aminotransferase domain -0.42

    Or look for positive cofitness