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  • Negative cofitness for GFF3618 from Variovorax sp. SCN45

    Transcriptional regulator, LysR family
    SEED: Transcriptional regulator, LysR family

    Computing cofitness values with 61 experiments...

    Genes with the strongest negative cofitness:

    Rank Hit Name Description Cofit  
    1 GFF6899 Biofilm PGA synthesis deacetylase PgaB (EC 3.-) -0.69
    2 GFF5869 internalin, putative -0.68
    3 GFF6898 hypothetical protein -0.67
    4 GFF5064 Exonuclease SbcC -0.67
    5 GFF6901 no description -0.64
    6 GFF5871 hypothetical protein -0.63
    7 GFF5868 hypothetical protein -0.63
    8 GFF5410 Adenylate cyclase (EC 4.6.1.1) -0.63
    9 GFF359 D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) -0.62
    10 GFF6037 Transcriptional regulator, Crp/Fnr family -0.61
    11 GFF5021 Tripartite tricarboxylate transporter TctA family -0.60
    12 GFF183 Virulence protein -0.59
    13 GFF5870 hypothetical protein -0.59
    14 GFF3923 Kynurenine formamidase, bacterial (EC 3.5.1.9) -0.59
    15 GFF6900 Biofilm PGA synthesis N-glycosyltransferase PgaC (EC 2.4.-.-) -0.57
    16 GFF2182 Inner membrane component of TAM transport system -0.55
    17 GFF452 Chloride channel protein -0.55
    18 GFF6513 Phosphogluconate dehydratase (EC 4.2.1.12) -0.54
    19 GFF5261 Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) -0.53
    20 GFF6189 Similar to phosphoglycolate phosphatase, clustered with ubiquinone biosynthesis SAM-dependent O-methyltransferase -0.53

    Or look for positive cofitness